YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1354494
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGVRYNTTNN GYRECLANGS WAARVNYSEC QEILNEEKKS KVHYHVAVII NYLGHCISLV  60
   61 ALLVAFVLFL RLRSIRCLRN IIHWNLISAF ILRNATWFVV QLTVSPEVHQ SNVVYLSPSL 120
  121 WLGPLGSCTT TMKSAGLANV LGYTLTTSTR AP

Type	Start	End	Confidence
Non-Cytoplasmic	1	50	0.89
Transmembrane Helix	51	70	0.95
Cytoplasmic	71	80	0.78
Transmembrane Helix	81	100	0.82
Non-Cytoplasmic	101	120	0.76
Transmembrane Helix	121	143	0.57
Cytoplasmic	144	152	0.63