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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149023347, gi...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSCESSGDS ADDPLSRGLR RRGQPRVVVI GAGLAGLAAA RALLEQGFTD VTVLEASSHI  60
   61 GGRVQSVKLG HATFELGATW IHGSHGNPIY QLAEANGLLE ETTDGERSVG RISLYSKNGV 120
  121 ACYLTNRGRR IPKDVVEEFS DLYNEVYNLT QEFFRNGKPV NAESQNSVGV FTREKVRNRI 180
  181 RDDPDDTEAT KRLKLAMIQQ YLKVESCESS SHSIDEVSLS AFGEWTEIPG AHHIIPSGFM 240
  241 RVVELLAKGI PPHVIQLGKP VRCIHWDQAS ARPRGPEIEP RGEGDHNHDA GEGGQSGENP 300
  301 QQGRWDEDEQ WPVVVECEDC EVIPADHVIV TVSLGVLKRQ YTSFFRPCLP TEKVAAIHRL 360
  361 GIGTTDKIFL EFEEPFWGPE CNSLQFVWED EAESCTLTYP PELWYRKICG FDVLYPPERY 420
  421 GHVLSGWICG EEALVMERCD DEAVAEICTE MLRQFTGNPN IPKPRRILRS AWGSNPYFRG 480
  481 SYSYTQVGSS GADVEKLAKP LPYTESSKTA PMQVLFSGEA THRKYYSTTH GALLSGQREA 540
  541 ARLIEMYRDL FQQGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle