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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNGA1_RAT
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTNIINTWH SFVNIPNVVV PAIEKEIRRM ENGACSSFSD NDNGSLSEES ENEDSLFRSN  60
   61 SYRRRGPSQR EHYLPGTMAL FNVNNSSNKD QDPKEKKKKK KEKKSKADDK KESKKDPEKK 120
  121 KKKEKEKEKK KEEKPKEKKE EEKKEVVVID PSGNMYYNWL FCITLPVMYN WTMIIARACF 180
  181 DELQSDYLEY WLIFDYVSDV VYLADMFVRT RTGYLEQGLL VKDELKLIEK YKANLQFKLD 240
  241 VLSVIPTDLL YFKFGWNYPE IRLNRLLRIS RMFEFFQRTE TRTNYPNIFR ISNLVMYIVI 300
  301 IIHWNACVYY SISKAIGFGN DTWVYPDVND PEFGRLARKY VYSLYWSTLT LTTIGETPPP 360
  361 VLDSEYVFVV VDFLIGVLIF ATIVGNIGSM ISNMNAARAE FQSRVDAIKQ YMNFRNVSKD 420
  421 MEKRVIKWFD YLWTNKKTVD EREVLRYLPD KLRAEIAINV HLDTLKKVRI FADCEAGLLV 480
  481 ELVLKLQPQV YSPGDYICKK GDIGREMYII KEGKLAVVAD DGITQFVVLS DGSYFGEISI 540
  541 LNIKGSKAGN RRTANIKSIG YSDLFCLSKD DLMEALTEYP DAKTMLEEKG RQILMKDGLL 600
  601 DINIANLGSD PKDLEEKVTR MEGSVDLLQT RFARILAEYE SMQQKLKQRL TKVEKFLKPL 660
  661 IETEFSALEE PGGESEPTES LQG

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