YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TNFL4_RAT
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGEGVQPPD ENLENGSRPR FKWKKVLRLV VSGIKAAGLL LCVVYVCLQF SSSPAKDSPI  60
   61 QRLRAPVTGC EGGRLFIGTS KNEYETMEVQ NNSVIINCDG LYLIHLKGSF FQEVKINLHF 120
  121 RKDRSPIFVP MLNNGQRVVF TVVTSLAFKD EVYLTVNASD TLCEHLQIND GELIIVQLTP 180
  181 NGYCAPERPY SSTVNQVPL

Type	Start	End	Confidence
Cytoplasmic	1	25	0.93
Transmembrane Helix	26	48	0.86
Non-Cytoplasmic	49	199	0.98