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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16225670, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.40
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAAELLLL IRTWLAESND PSPTPKFHFE LSSSMPEVIL DLFNCKNCAN EAVVQKILDR  60
   61 VLSTYDVRLR PNFGGAPVPV SISIYVSSIE QISEINMDYT ITMFLHQTWK DTRLAYYETN 120
  121 LNLTLDYRMH EKLWVPDCYF VNSKDAFVHD VTAENRVFQL HPDGTVQYGI RLTTTAACSL 180
  181 DLQKFPMDKQ SCKLEVESYG YTVEDIVLSW EDDNAIHITD ELHIPQYTYL GRTITSKEVY 240
  241 FYTGSYMRLI VKFQVQREVR SYLVQVYWPT VLTTILSWIS FWMNYGSSAA RVTIGLTSIL 300
  301 VLTTIDSHMR DKLPHISCIK AIDIYILVCL FFVFLSLLEY VYINYLFFSQ APRRNHRRCR 360
  361 KPRRVVARYR YQEVVVAHVQ DGLINVEDRV EDRAGPLPDS PMQAHLASQE SLGSLLFTSE 420
  421 EAQLATSESL SLLSSASSQV QLATGESLGD LPSTSEQTLP DYTIHFHGFL TNDSILPIKI 480
  481 RSHSDALGDE DSEESLSSEE SYGHGGSPTG RLKLQISQRC VQEASWDIDK IESLQDDISI 540
  541 KSSWLGLDEQ RKGDADSIWS LTDEELMACD QEKDSSSSSE SEESCSPSPG CSFNEGFSFQ 600
  601 LFNPNRVPKV DRWSRFLFPL SFGLFNVVYW LYHMY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle