YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109467232, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAWVRFSAQ SQARERLCRA AQYACSLLGH ALQRHGASPE LQKQIRQLEG HLSLGRKLLR  60
   61 LGNSADALES AKRAVHLSDV VLRFCITVSH LNRALYFACD NVLWAGKSGL APRVDQEKWA 120
  121 QRSFRYYLFS LIMNLSRDAY EIRLLMEQET SAHSRRMKIS GVGVSGLETG GPGGPGTPGG 180
  181 CLPQLALKFR LRILLLARVL RDHPPLLLDV LRNACDLFIP LDKLGLWRCG PGIVGLCGLI 240
  241 SSVLSILTLI CPWLRLKP

Type	Start	End	Confidence
Cytoplasmic	1	228	0.55
Transmembrane Helix	229	254	0.82
Non-Cytoplasmic	255	258	0.45