YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CD3G_RAT
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.72
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQGKGLAGL FLVISLLQGT MAQQKEEKHL VKVDDSQGDG SVLLTCDFNE KTITWLKDGH  60
   61 RISPPNATKS TWNLGNGAKD PRGMYQCRGA KKKSQLLQVY YRLCENCIEL NMGTVSGFIF 120
  121 AEIISIFFLA VGVYFIAGQD GVRQSRASDK QTLLQNEQVY QPLKDREYEQ YSRLQGNQVR 180
  181 KK

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	117	0.99
Transmembrane Helix	118	138	0.68
Cytoplasmic	139	182	0.71