YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149030059, gi...
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLLALLGP AGRVGARLRL PPPWLLGTAT SCTPPLWAVA LSRPGPDARL LRTARGDCLR  60
   61 LQAPNRTTDP GSGATSTEKK LSKSQQLKKV FQEYGAVGVS LHIGISLVSL GIFYTIVSSG 120
  121 IDMSAILLKL GFKESLVQSK MAAGTSTFVV AYAVHKLFAP VRISITLVSV PFLVRYFRSV 180
  181 GLFKPPAAKP

Type	Start	End	Confidence
Cytoplasmic	1	20	0.64
Transmembrane Helix	21	41	0.52
Non-Cytoplasmic	42	95	0.61
Transmembrane Helix	96	121	0.73
Cytoplasmic	122	135	0.46
Transmembrane Helix	136	155	0.45
Non-Cytoplasmic	156	157	0.49
Transmembrane Helix	158	177	0.60
Cytoplasmic	178	190	0.68