YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74179514, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALRAGLTL ALGAGLGAAA EHWRRREGKG PGLLGRVPVL PVVAADLPAL PGGPAGSTGE  60
   61 LAKYGLPGVA QLRSRESYVL SYDPRTRGAL WVLEQLRPER LRGDGDRRAC DFHEDDSVHA 120
  121 YHRATNADYR GSGFDRGHLA AAANHRWSQR AMDDTFYLSN VAPQVPHLNQ HAWNNLEKYS 180
  181 RSLTRTYQNV YVCTGPLFLP RTEADGKSYV KYQVIGKNHV AVPTHFFKVL ILEAASGQIE 240
  241 LRSYVMPNAP VDETLPLERF LVPIESIERA SGLLFVPNIL ARAGNLKAIT AGSK

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	294	0.99