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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LYRIC_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARSWQDEL AQQAEEGSAR LRELLSVGLG FLRTELGLDL GLEPKRYPSW VILVGTGALG  60
   61 LLLLFLLGYG WAAACAGARK KRRSPPRKRE EVTPPTPAPE DPAQLKNLRS EEQKKKNRKK 120
  121 LPEKPKPNGR TVEIPEDEVV RTPRSITAKQ PPETDKKNEK SKKNKKKSKS DAKAVQNSSR 180
  181 HDGKEVDEGA WETKISHREK RQQRKRDKVL TDSGSLDSTI PGIENTITVT TEQLTTASFP 240
  241 VGSKKNKGDS HLNVQVSNFK SGKGDSTLQV SSGLNENITV NGGGWSEKSV KLSSQLSAGE 300
  301 EKWNSVPPAS AGKRKTEQSA WTQDPGDTNA NGKDWGRNWS DRSIFSGIGS TAEPVSQSTT 360
  361 SDYQWDGSRN QPHIDDEWSG LNGLSSADPS SDWNAPAEEW GNWVDEDRAS LLKSQEPISN 420
  421 DQKDSDDDKE KGEGALPTGK SKKKKKKKKK QGEDNSITQD TEDLEKDTRE ELPVNTSKAR 480
  481 PKQEKACSLK TMSTSDPVEV LIKNSQPIKT LPPAISAEPS VTLSKGDSDK SSSQVPPMLQ 540
  541 DTDKPKSNAK QNSVPPSQTK SETNWESPKQ IKKKKKARRE T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle