YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1045653, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLGLQRYK THLQLPSRTW PFGVLLSLLF IPIFSEAIQV TQPSVVLASS HGVASFPCEY  60
   61 ASSHNTDEVR VTVLRQTNDQ VTEVCATTFT VKNTLGFLDD PFCSGTFNES RVNLTIQGLR 120
  121 AADTGLYFCK VELMYPPPYF VGMGNGTQIY VIDPEPCPDS DFLLWILAAV SSGLFFYSFL 180
  181 VTAVSLNRTL KKRSPLTTGV YVKMPPTEPE CEKQFQPYFI PIN

Type	Start	End	Confidence
Cytoplasmic	1	18	0.61
Transmembrane Helix	19	38	0.59
Non-Cytoplasmic	39	162	0.97
Transmembrane Helix	163	184	0.90
Cytoplasmic	185	223	0.92