YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149062263, gi...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDEHLDPI PDSFILQPPV FHPVIPYVTT IFGGLYAGKM IMLQGVVPRH ARRFQVDFQC  60
   61 GCCLHPRPDV AFHFSPRFYT VKPHVICNTL QGGLWQKEVR WPGIALQKGA SFLILFLFDN 120
  121 EEVKVSVNGQ HFLHYRYRLP LSRVDTLDIS GDILVKAVGF LNISPFVEGS REYPVGYPLL 180
  181 LYSPRLEVPC SRALPRGLWP GQVIVVRGLV LKEPKDFTLS LRDGATHVPV TLRASFTDRT 240
  241 LAWVSSWGRK KLISAPFLFY PQRFFEVLLL CQEGGLKLAL NGHGLGATSL DQKALEQLRD 300
  301 LRISGSVHLY CVHC

Type	Start	End	Confidence
Non-Cytoplasmic	1	23	0.85
Transmembrane Helix	24	43	0.59
Cytoplasmic	44	314	0.51