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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ECM1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTIRSSALI LACLALASAA SEGAFKVSDQ REMKPEHLFQ HLHEVGYAAP PSPPQTRRLQ  60
   61 VHHSETSPHD PPLFEEQKEV QPPSSPEDIP VYEEEWLTFL NPNVGKVDPA LPQEAIPLQK 120
  121 EQPPPRIPIE QKEIDPPVQH QEEIVQSRQK EEKPPTLTGQ HPPEPRTWNP ARHCQQGRRG 180
  181 IWGHRLDGFP PGRPSPDNLK QICLPERQHV VYGPWNLPQT GYSHLSRQGE ALNLLETGYS 240
  241 RCCRCRSDTN RLDCVKLVWE DAMTQFCEAE FSVKTRPHLC CKQRGEERFS CFQKEAPRPD 300
  301 YLLRPCPIHQ TGISSGTQLP FPPGLPTPDN VKNICLLRRF RSVPRNLPAT DAIQRQLQAL 360
  361 TRLETEFQRC CRQGHNHTCT WKAWEDTLDG YCDRELAIKT HPHSCCHYPP SPARDECFAH 420
  421 LAPYPNYDRD LLTVDLSRVT PNLMDHLCGN GRVLSKHKQI PGLIQNMTVR CCELPYPEQA 480
  481 CCGEEEKLAF IEDLCGPRRN SWKDPALCCT LSPGDKQANC FNTNYLRNVA LVAGDTGNAT 540
  541 GLGQQGPTGG TNVGPAPGSK EE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle