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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ITIH3_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLWWPCLV LALLSGLETS GFPRSPLRLL GKRSLPEGVV DGIEIYSTKI SCKVTSRFAH  60
   61 NVVTTRAVNR ADKAKEVSFD VELPKTAFIT NFTLTIDGVT YPGSVKEKEV AQKQYEKAVS 120
  121 QGKTAGLVKA SGRKLEKFTV SVNVAAGSKV IFELTYEELL KRNKGKYEMY LKVQPKQLVR 180
  181 HFEIDAHIFE PQGISMLDAD ASFITNDLLG SALTKSFSGK KGHVSFKPSL DQQRSCPTCT 240
  241 DSLLNGDFTI VYDVNRESPG NVQIVNGYFV HFFAPQGLPV VPKNIAFVID VSGSMSGRKI 300
  301 QQTREALLKI LDDMKEEDYL NFILFSTGVT TWKDHLVKAT PANLEEARAF VKNIRDRSMT 360
  361 NINDGLLRGI EMLNKAREDH LVPERSTSIL VMLTDGDANT GESRPEKIQE NVRNAIRGKF 420
  421 PLYNLGFGNN LNYNFLESLA LENHGFARRI YEDSDASLQL QGFYEEVANP LLTNVELEYP 480
  481 ENAILDLTRN SYPHFYDGSE IVVAGRLVDR NVDNFKADVK GHGALNDLTF TEEVDMKEMD 540
  541 AALKEQGYIF GDYIERLWAY LTIEQLLEKR KNARGDEKEN ITAEALELSL KYHFVTPLTS 600
  601 MVVTKPEDNE DQTAIADKPG EEAISASTAY LTSQQSSHSP YYYVDGDPHF IIQVPGKNDT 660
  661 ICFNIDEKPG TVLSLIQDPV TGIAVTGQII GEKGNNASSR TGKTYFGKLG IANAWMDFRI 720
  721 EVTTEKIILG NGDALSTFSW LDTVTVTQTG LSVTINRKKN MVVSFEDGIS FVIVLHQVWK 780
  781 KHPVHQDFLG FYVVDSHRMS AQTHGLLGQF FQPFDFKVFD VRPGSDPMKP DATMVVKSHR 840
  841 LTVTRGSQKD YRKDASVGTK VVCWFVHNNG EGFIDGVHTD YIVPSLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle