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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18308174, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLLPAARL PAGFLFLVLW GSVLGDKLLV VPQDGSHWLS MKEIVEHLSE RGHDIVVLVP  60
   61 EVNLLLGESK YYRRKSFPVP YNLEELRTRY RSFGNNHFAA SSPLMAPLRE YRNNMIVIDM 120
  121 CFFSCQSLLK DSATLSFLRE NQFDALFTDP AMPCGVILAE YLKLPSIYLF RGFPCSLEHM 180
  181 LGQSPSPVSY VPRFYTKFSD HMTFPQRLAN FIANILENYL YHCLYSKYEI LASDLLKRDV 240
  241 SLPALHQNSL WLLRYDFVFE YPRPVMPNMI FIGGTNCKKK GNLSQEFEAY VNASGEHGIV 300
  301 VFSLGSMVSE IPEKKAMEIA EALGRIPQTV LWRYTGTRPS NLAKNTILVK WLPQNDLLGH 360
  361 PKARAFITHS GSHGIYEGIC NGVPMVMMPL FGDQMDNAKR METRGAGVTL NVLEMTADDL 420
  421 ENALKTVINN KSYKENIMRL SSLHKDRPIE PLDLAVFWVE YVMRHKGAPH LRPAAHDLTW 480
  481 YQYHSLDVIG FLLAIVLTVV FIVYKSCAYG CRKCFGGKGR VKKSHKSKTH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle