YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1903381, gi\|6...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNCKMARVA SILGLVMLSV ALLILSLISY VSLKKENIFT TPKYASPGAP RMYMFHAGFR  60
   61 SQFALKFLEP SFVPITNFLT HELQEKPSKW TFNRTAFLHQ RQEILQHVDV IKNFSLTKNS 120
  121 VRIGQLIHYD YSSHKYVFSI SNNFRSLLPD VSPILNKRYN ICAVVGNSGI LTGSQCGQEI 180
  181 DKSDFVFRCN FAPTEAFHKD VGKKTNLTTF NPSILEKYYN NLLTIQDRNN FFLSLKKLDG 240
  241 AILWIPAFFF HTSATVTRTL VDFFVEHRGQ LKVQLAWPGN IMQHVNRYWK NKHLSPKRLS 300
  301 TGFLMYTLAS AICEEIHLYG FWPFGFDPNT REDLPYHYYD KKGTKFTTKW QESHQLPAEF 360
  361 QLLYRMHGEG LTKLTLSHCA

Type	Start	End	Confidence
Signal Peptide	1	33	0.61
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	380	0.95