YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12621104, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYGPLDMYR NPGRRSLRDF SSIIQTCSGN IQRISQATAQ IKNLMSQLGT KQDSSKLQEN  60
   61 LQQFQHSTNQ LAKETNELLK ELGSLPLPLS ASEQRQQKLQ KERLMNDFSS ALNNFQVVQR 120
  121 KVSEKEKESI ARARAGSRLS AEDRQREEQL VSFDSHEEWN QMQSQEEEAA ITEQDLELIK 180
  181 ERETAIQQLE ADILDVNQIF KDLAMMIHDQ GDLIDSIEAN VESSEVHVER ASDQLQRAAY 240
  241 YQKKSRKKMC ILVLVLSVIV TVLVVVIWVA SK

Type	Start	End	Confidence
Cytoplasmic	1	249	0.97
Transmembrane Helix	250	270	0.96
Non-Cytoplasmic	271	272	0.80