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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: S27A1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTPGAGTAS VASLGLLWLL GLPWTWSAAA AFGVYVGSGG WRFLRIVCKT ARRDLFGLSV  60
   61 LIRVRLELRR HRRAGDTIPR IFQAVAQRQP ERLALVDASS GICWTFAQLD TYSNAVANLF 120
  121 LQLGFAPGDV VAVFLEGRPE FVGLWLGLAK AGVVAALLNV NLRREPLAFC LGTSAAKALI 180
  181 YGGEMAAAVA EVSEQLGKSL LKFCSGDLGP ESVLPDTQLL DPMLAEAPTT PLAQAPGKGM 240
  241 DDRLFYIYTS GTTGLPKAAI VVHSRYYRIA AFGHHSYSMR ANDVLYDCLP LYHSAGNIMG 300
  301 VGQCIIYGLT VVLRKKFSAS RFWDDCVKYN CTVVQYIGEI CRYLLRQPVR DVERRHRVRL 360
  361 AVGNGLRPAI WEEFTQGFGV RQIGEFYGAT ECNCSIANMD GKVGSCGFNS RILTHVYPIR 420
  421 LVKVNEDTME PLRDSQGLCI PCQPGEPGLL VGQINQQDPL RRFDGYVSDS ATNKKIAHSV 480
  481 FRKGDSAYLS GDVLVMDELG YMYFRDRSGD TFRWRGENVS TTEVEAVLSR LLGQTDVAVY 540
  541 GVAVPGVEGK SGMAAIADPH NQLDPNSMYQ ELQKVLASYA QPIFLRLLPQ VDTTGTFKIQ 600
  601 KTRLQREGFD PRQTSDRLFF LDLKQGRYLP LDERVHARIC AGDFSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle