YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RNS10_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVTLVHLLF MMLLLLLGLG VGLGLGLHMA AAILENQPLD EFWPSDSQDT AEATEEGQGT  60
   61 RTTEALVLDN KEMAVPVWSE DTVLSEDEVG GSRMLRAKTL LQSKQGYLKF DLNIRDCNVM 120
  121 MAHKIKEHNQ SCINDYTFIH EDPSTVGAVC NSPLVDCDLK GGKCHKSPRP FDLTLCKLAK 180
  181 PGQVTPNCHY LTYITEKVII ITCNNTKQLE IK

Type	Start	End	Confidence
Signal Peptide	1	32	0.89
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	212	0.99