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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CUZD1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTGRLFIW AILAVSCRAQ LNSTAAEGRP RCTASLGGAN LGETHKALIL NLNADENCTW  60
   61 TIERPENRSI RIIFSHIQLD PDSRCENESI KVFDGRSTSG PLLGEACSKN DFVPVFESSA 120
  121 NSLTFQIVTD WTRVQRSVFI FYYFFSSGTT IPNCGGYLQT LEGSFSSPNY PRPHPELAYC 180
  181 VWHIQVEKGY KINLNFTELF LEMDEYCRFD FIAVYDGPST TSGLLKQVCG RGTPTFESSS 240
  241 DAMTVVLSTD YANSYRGFFA SYASTYVQEV NTHSLSCASD KMRVIISKSY LQSLNYHESN 300
  301 LQLNDPTCRP SVSNVVEFSI PLHECGTIKK IEDHTISYTN IITFTQSPES AVITRKRHLQ 360
  361 IVVTCEMEYN STVEILYITE DDVIQNQSVL GKYNTSMALY ESGSFENLIQ ESPYYVDLNQ 420
  421 TLFVQATLHT SDPSLVVFLD TCRASPTSDF ASPTYDLISS GCSRDETCEV YPLFGHYGRF 480
  481 QFNAFKFLRH LSSVYLKCKI LICDTSDHTS RCNQGCVSRR KRDIPSYKWK TDSVIGPIRL 540
  541 KRDRLVNGDS GLLPQTHEAE ISKQPLSHLH LFSFMVLALN VVIVVTATVR HFLNRWKDHG 600
  601 YQKLQVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle