YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4322385
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAAGESPQGN EREFCPQGKA NWKTFVISSI CIAIIVVGTF SIRYFRQKAF TLLSTLKPQW  60
   61 YCRTIPDPAN STWVKKYPIM EEKIQPPMDN LLMAWSAPEE PEPLIINEVL YQMIPVGRQP 120
  121 YCFKRGQGFQ GYS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.62
Transmembrane Helix	21	45	0.83
Non-Cytoplasmic	46	133	0.65