YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5263196
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNEILILGA KLHPTLKLEE ITNRKGLTPL ALAASSGKIG VLAYILQREI HEPECRHLSR  60
   61 KFTEWAYGAV HSSLYDLSCI DTCEKNSVLE VIAYSSSETP NRHDMLLVEP LNRLLQDKWD 120
  121 RFVKRIFYFN FFVYCLYMII FTAAAYYRPV EGLPPYKLKN TVGDYFRVTG EILSVSGGVY 180
  181 FFFRGIQYFL QRRPSLKSLF VDSYSEILFF VQSLFMLVSV VLYFSQRKEY VASMVFSLAM 240
  241 GWTNMLYYTR GFQQMGIYAV MIEKMILRDL CRFMFVYLVF LFGFSTAVVT LIEDGKNNSL 300
  301 PMESTPHKCR GSACKPGNSY NSLYSTCLEL FKFTIGMGDL EFTENYDFKA VFIILLLAYV 360
  361 ILTYILLLNM LIALMGETVG QVSKESKHIW KLQWATTILD IERSFPVFLR KAFRSGEMVT 420
  421 VGKSSDGTPD RRWCFRVDEV NWSHWNQNLG IINEDPGKSE IYQYYGFSHT MGRLRRDRWS 480
  481 SVVPRVVELN KNSDTDEVVV PLDNLGNPNC DGHQQGYAPK WRAEDAPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle