YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ASGR1_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDYQDFQH LDNENDHHQL QRGPPPAPRL LQRLCSGFRL FLLSLGLSIL LLVVVCVITS  60
   61 QNSQLREDLR VLRQNFSNFT VSTEDQVKAL TTQGERVGRK MKLVESQLEK HQEDLREDHS 120
  121 RLLLHVKQLV SDVRSLSCQM AALRGNGSER ICCPINWVEY EGSCYWFSSS VKPWTEADKY 180
  181 CQLENAHLVV VTSWEEQRFV QQHMGPLNTW IGLTDQNGPW KWVDGTDYET GFKNWRPGQP 240
  241 DDWYGHGLGG GEDCAHFTTD GHWNDDVCRR PYRWVCETEL GKAN

Type	Start	End	Confidence
Cytoplasmic	1	37	0.96
Transmembrane Helix	38	59	0.93
Non-Cytoplasmic	60	284	0.98