YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRDX4_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METWSKLLDG TTPSRRWRKL VLLLPPLLLF LLQTEALQGL ESDDRFRTRE NECHFYAGGQ  60
   61 VYPGEVSRVS VADHSLHLSK AKISKPAPYW EGTAVINGEF KELKLTDYRG KYLVFFFYPL 120
  121 DFTFVCPTEI IAFGDRIEEF KSINTEVVAC SVDSQFTHLA WINTPRRQGG LGPIRIPLLS 180
  181 DLNHQISKDY GVYLEDSGHT LRGLFIIDDK GVLRQITLND LPVGRSVDET LRLVQAFQYT 240
  241 DKHGEVCPAG WKPGSETIIP DPAGKLKYFD KLN

Type	Start	End	Confidence
Signal Peptide	1	36	0.99
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	273	0.99