YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109459801, gi...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTTKELLIS PVLILSCTRG LIRPVSASLL SRPEAPSKKP SCCSSPLQVA RREFQTSVIS  60
   61 RDIDTAAKFI GAGTATVGVA GSGAGVGTVF GSLIIGDARN PSLKQQLFAY AIPGFALSEA 120
  121 MGLFCLMVAF LILFAM

Type	Start	End	Confidence
Cytoplasmic	1	68	0.71
Transmembrane Helix	69	95	0.78
Non-Cytoplasmic	96	110	0.68
Transmembrane Helix	111	134	0.91
Cytoplasmic	135	136	0.63