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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TS1R1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFWAAHLLL SLQLVYCWAF SCQRTESSPG FSLPGDFLLA GLFSLHGDCL QVRHRPLVTS  60
   61 CDRPDSFNGH GYHLFQAMRF TVEEINNSSA LLPNITLGYE LYDVCSESAN VYATLRVLAL 120
  121 QGPRHIEIQK DLRNHSSKVV AFIGPDNTDH AVTTAALLGP FLMPLVSYEA SSVVLSAKRK 180
  181 FPSFLRTVPS DRHQVEVMVQ LLQSFGWVWI SLIGSYGDYG QLGVQALEEL AVPRGICVAF 240
  241 KDIVPFSARV GDPRMQSMMQ HLAQARTTVV VVFSNRHLAR VFFRSVVLAN LTGKVWVASE 300
  301 DWAISTYITS VTGIQGIGTV LGVAVQQRQV PGLKEFEESY VRAVTAAPSA CPEGSWCSTN 360
  361 QLCRECHTFT TRNMPTLGAF SMSAAYRVYE AVYAVAHGLH QLLGCTSEIC SRGPVYPWQL 420
  421 LQQIYKVNFL LHENTVAFDD NGDTLGYYDI IAWDWNGPEW TFEIIGSASL SPVHLDINKT 480
  481 KIQWHGKNNQ VPVSVCTTDC LAGHHRVVVG SHHCCFECVP CEAGTFLNMS ELHICQPCGT 540
  541 EEWAPKESTT CFPRTVEFLA WHEPISLVLI AANTLLLLLL VGTAGLFAWH FHTPVVRSAG 600
  601 GRLCFLMLGS LVAGSCSFYS FFGEPTVPAC LLRQPLFSLG FAIFLSCLTI RSFQLVIIFK 660
  661 FSTKVPTFYR TWAQNHGAGL FVIVSSTVHL LICLTWLVMW TPRPTREYQR FPHLVILECT 720
  721 EVNSVGFLLA FTHNILLSIS TFVCSYLGKE LPENYNEAKC VTFSLLLNFV SWIAFFTMAS 780
  781 IYQGSYLPAV NVLAGLTTLS GGFSGYFLPK CYVILCRPEL NNTEHFQASI QDYTRRCGTT 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle