YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27688941, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGSFDRKLS SILTDISSSL SCHAGSKDSP TLPESSVTDL GYYSAPQHDY YSGQPYGQTV  60
   61 NPYTYHHQFN LNGLAGTGAY SPKSEYTYGG SYRQYGAYRE QPLPAQDPVS VKEEPEAEVR 120
  121 MVNGKPKKVR KPRTIYSSYQ LAALQRRFQK AQYLALPERA ELAAQLGLTQ TQVKIWFQNR 180
  181 RSKFKKLYKN GEVPLEHSPN NSDSMACNSP PSPALWDTSS HSTPAPTRNP LPPPLPYSAS 240
  241 PNYLDDPTNS WYHTQNLSGP HLQQQPPQPA TLHHASPGPP PNPGAVY

Type	Start	End	Confidence
Signal Peptide	1	24	0.77
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	287	0.99