YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2RY6_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERDNGTIQA PGLPPTTCVY REDFKRLLLP PVYSVVLVVG LPLNVCVIAQ ICASRRTLTR  60
   61 SAVYTLNLAL ADLLYACSLP LLIYNYARGD HWPFGDLACR LVRFLFYANL HGSILFLTCI 120
  121 SFQRYLGICH PLAPWHKRGG RRAAWVVCGV VWLVVTAQCL PTAVFAATGI QRNRTVCYDL 180
  181 SPPILSTRYL PYGMALTVIG FLLPFTALLA CYCRMARRLC RQDGPAGPVA QERRSKAARM 240
  241 AVVVAAVFVI SFLPFHITKT AYLAVRSTPG VSCPVLETFA AAYKGTRPFA SANSVLDPIL 300
  301 FYFTQQKFRR QPHDLLQKLT AKWQRQRV

Type	Start	End	Confidence
Non-Cytoplasmic	1	31	0.79
Transmembrane Helix	32	53	0.76
Cytoplasmic	54	62	0.90
Transmembrane Helix	63	84	0.93
Non-Cytoplasmic	85	104	0.90
Transmembrane Helix	105	127	0.85
Cytoplasmic	128	142	0.92
Transmembrane Helix	143	165	0.90
Non-Cytoplasmic	166	191	0.89
Transmembrane Helix	192	213	0.93
Cytoplasmic	214	236	0.94
Transmembrane Helix	237	258	0.89
Non-Cytoplasmic	259	328	0.76