YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BAMBI_RAT
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRHSSYIFI WLQLELCAMA VLLTKGEIRC YCDAAHCVAT GYMCKSELSA CFSRLLDPQN  60
   61 TNSPLTHGCL DSLASTADIC RAKQAQNHSG PTMPTLECCH EDMCNYRGLH DVLSPPKSEA 120
  121 SGQGNRYQHD SSRNLITKVQ ELTSSKELWF RAAVIAVPIA GGLILVLLIM LALRMLRSEN 180
  181 KRLQDQRQQM LSRLHYSFHG HHSKKGQVAK LDLECMVPVS GQENCCLTCD KMRQADLSNE 240
  241 KILSLVHWGM YSGHGKLEFV

Type	Start	End	Confidence
Non-Cytoplasmic	1	148	0.69
Transmembrane Helix	149	173	0.89
Cytoplasmic	174	260	0.72