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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLOD1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLLLLASL AWLLLAQAKD DAKLEDNLLV LTVATKETEG FRRFKRSAQF FNYKIQSLGL  60
   61 GEDWSAAGGP SAAGGGQKVR LLKKALKKYA DKEDLVILFV DSYDVVFASG PRELLKKFQQ 120
  121 AKSRVVFSAE ELIYPDRRLE AKYPTVPDGK RFLGSGGFIG YAPSLSKLVA EWEGQDNDSD 180
  181 QLFYTKIFLD PEKREQINIS LDHRCRIFQN LDGALDEVVL KFEMGHVRAR NLAYDTLPVV 240
  241 IHGNGPTKLQ VNYLGNYIPR FWTFETGCTV CDEGLRSLKG IGDEALPTVL VGVFIEQPTP 300
  301 FLSLFFRRLL HLRYPQKQMR LFIHNQEQHH KLQVEQFLAE HGGEYQSVKL VGPEVRMANA 360
  361 DARNMGADLC RQDQTCTYYF SVDADVALTE PNSLRLLIEQ NKNVIAPLMT RHGRLWSNFW 420
  421 GALSADGYYA RSEDYVDIVQ GRRVGVWNVP YISNIYLIKG SALRAELRHV DLFHYSKLDP 480
  481 DMSFCANVRQ QEVFMFLTNR HTFGHLLSLD NYQTTHLHND LWEVFSNPQD WKEKYIHENY 540
  541 TKALAGKLVE TPCPDVYWFP IFTEVACDEL VEEMEHYGQW SLGDNKDNRI QGGYENVPTI 600
  601 DIHMNQITFE REWHKFLVEY IAPLTEKLYP GYYTKAQFDL AFVVRYKPDE QPSLMPHHDA 660
  661 STFTINIALN RVGEDYEGGG CRFLRYNCSV RAPRKGWALM HPGRLTHYHE GLPTTKGTRY 720
  721 IAVSFVDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle