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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18389317, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVPLAWCV ALCCWGCAAP KDTQTEADSP FVGNPGNITG ARGLTGTLRC ELQVQGEPPE  60
   61 VMWLRDGQIL ELADNTQTQV PLGEDWQDEW KVVSQLRISA LQLSDAGEYQ CMVHLEGRTF 120
  121 VSQPGFVGLE GLPYFLEEPE DKAVPANTPF NLSCQAQGPP EPVTLLWLQD AVPLAPVAGY 180
  181 SFQHSLQAPG LNKTSSFSCE AHNAKGVTTS RTATITVLPQ RPHNLHVVSR HPTELEVAWI 240
  241 PTLSGIYPLT HCTLQAVLSN DGVGVWLGKS DPPEEPLTVQ VSVPPHQLRL EKLLPHTPYH 300
  301 IRVSCTSSQG PSPWTHWLPV ETTEGVPLGP PENVSAMRNG SQALVRWQEP REPLQGTLLG 360
  361 YRLAYRGQDT PEVLMDIGLT REVTLELRGD RPVANLTVSV AAYTSAGDGP WSLPVPLEPW 420
  421 RPGQGQPLHH LVSEPPPPAF SWPWWYVLLG ALVAAACVLI LTLFLVHRRK KETRYGEVFE 480
  481 PTVERGELVV RYRARKSYSR RTTEATLNSL GISEELKEKL RDVMVDRHKV ALGKTLGEGE 540
  541 FGAVMEGQLN QDDSILKVAV KTMKIAICTR SELEDFLSEA VCMKEFDHPN VMRLIGVCFQ 600
  601 GSDREGFPEP VVILPFMKHG DLHSFLLYSR LGDQPVFLPT QMLVKFMADI ASGMEYLSTK 660
  661 RFIHRDLAAR NCMLNENMSV CVADFGLSKK IYNGDYYRQG RIAKMPVKWI AIESLADRVY 720
  721 TSKSDVWSFG VTMWEIATRG QTPYPGVENS EIYDYLRQGN RLKQPLDCLD GLYALMSRCW 780
  781 ELNPRDRPSF AELREDLENT LKALPPAQEP DEILYVNMDE GGSHLEPRGA AGGADPPTQP 840
  841 DPKDYCSCLT AADVHSAGRY VLCPSTAPGP TLSADRGCPA PPGQEDGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle