YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOR3A_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFGAFWLLL LLLLPPLRPP GAQGHRGAKS PEQEADEPIP WPSIQRLREQ LRTAGTLSKR  60
   61 YWALFSCTLW PDHCEDQETP VPPLGWSLPL WGRRSLDMLT SWFCRFQDCC SAGNCRISNN 120
  121 FTGLESDLRV RLHGQHLASK LVLEAVKGYL EMPQVGKALA LSFHGWSGTG KNFVARMLVD 180
  181 NLYRDGMRSD CVKMFISTFH FPHPKYVDLY KEDLQRQMQE TQRRCQQSTF VFDEAEKLHP 240
  241 GLLELLEPYL EPRSPETHGA ELPRAIFLLL SNLGGSVINE VVLGLLKAGW SREEITLQHL 300
  301 EMPLQAEIIK SADSSFGSSR LLKKHLIDLF IPFLPLEYRH VRLCVRDAFL GQDLPYTEEA 360
  361 LDEIAKMMTY VPEEEQLFSS QGCKSISQRI NLVLP

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	395	0.98