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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: THYG_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTLVLWVST LLSSVCLVAA NIFEYQVDAQ PLRPCELQRE KAFLKQDEYV PQCSEDGSFQ  60
   61 TVQCQNDGQS CWCVDSDGTE VPGSRQLGRP TACLSFCQLH KQRILLSSYI NSTDALYLPQ 120
  121 CQDSGNYAPV QCDLQQVQCW CVDTEGMEVY GTRQQGRPTR CPRSCEIRSR RLLHGVGDKS 180
  181 PPQCDADGEF MPVQCKFVNT TDMMIFDLIH NYNRFPDAFV TFSAFRNRFP EVSGYCYCAD 240
  241 SQGRELAETG LELLLDEIYD TIFAGLDQAS TFTQSTMYRI LQRRFLAIQL VISGRFRCPT 300
  301 KCEVEQFTAT SFGHPYIPSC HRDGHYQTVQ CQMERMCWCV DAQGIEIPGT RQQGQPLFCA 360
  361 KDQSCASERQ QALSRLYFET PGYFSPQDLL SSEDRLVPVS GARLDISCPP RIKELFVDSG 420
  421 LLRSIAVERY QQLSESRSLL REAIRAIFPS RELAGLALQF TTNPKRLQQN LFGGTFLVNA 480
  481 AQLNLSGALG TRSTFNFSQF FQQFGLPGFL VRDRATDLAK LLPVSLDSSP TPVPLRVPEK 540
  541 RVAMNKSVVG TFGFKVNLQE NQDALKFLVS LMELPEFLVF LQRAVSVPED RARDLGDVME 600
  601 MVFSAQACKQ TSGRFFVPSC TAEGSYEDIQ CYAGECWCVN SQGKEVEGSR VSGGHPRCPT 660
  661 KCEKQRAQMQ NLAGAQPAGS SFFVPTCTSE GYFLPVQCFN SECYCVDAEG QVIPGTQSTI 720
  721 GEPKLCPSVC QLQAEQAFLG VVGVLLSNSS MVPPISSVYI PQCSTSGQWM PVQCDGPHEQ 780
  781 VFEWYERWNT QNSDGQELTT ATLLMKLMSY REVASTNFSL FLQSLYDAGQ QSIFPVLAQY 840
  841 PSLQDVPQVV LEGATIQPGE NIFLDPYIFW QILNGQLSQY PGPYSDFSMP LEHFNLRSCW 900
  901 CVDEAGQELD GTRTRAGEIP ACPGPCEEVK FRVLKFIKET EEIVSASNAS SFPLGESFLV 960
  961 AKGIQLTSEE LGLPPLYPSR EAFSEKFLRG SEYAIRLAAQ STLTFYQKLR ASLGESNGTA1020
 1021 SLLWSGPYMP QCNTIGGWEP VQCHPGTGQC WCVDGWGELI PGSLMARSSQ MPQCPTSCEL1080
 1081 SRANGLISAW KQAGHQRNPG PGDLFTPVCL QTGEYVRQQT SGTGAWCVDP SSGEGVPTNT1140
 1141 NSSAQCPGLC DALKSRVLSR KVGLGYTPVC EALDGGFSPV QCDLAQGSCW CVLASGEEVP1200
 1201 GTRVVGTQPA CESPQCPLPF SGSDVTDGVV FCETASSSGV TTVQQCQLFC RQGLRNVFSP1260
 1261 GPLICNLESQ RWVTLPLPRA CQRPQLWQTM QTQAHFQLLL PPGKMCSIDY SGLLQAFQVF1320
 1321 ILDELITRGF CQIQVKTFGT LVSRTVCDNS SIQVGCLTAE RLGVNATWKL QLEDISVGSL1380
 1381 PNLHSIERAL MGQDLLGRFA NLIQSGKFQL HLDSKTFSAD TILYFLNGDR FVTSPMTQLG1440
 1441 CLEGFYRVST TSQDPLGCVK CPEGSFSQDG KCTPCPAGTY QGQAGSSACI PCPRGRTTTI1500
 1501 TGAFSKTHCV TDCQRDEAGL QCDQNGQYQA NQKDMDSGEV FCVDSEGQRL QWLQTEAGLS1560
 1561 ESQCLMMRKF EKAPESKVIF DASSPVIVKS RVPSANSPLV QCLADCADDE ACSFVTVSSM1620
 1621 SSEVSCDLYS WTRDNFACVT SDQEEDAVDS LKETSFGSLR CQVKVRNSGK DSLAVYVKKG1680
 1681 HEFTASGQKS FEPTGFQNVL SGLYSSVVFS ALGTNLTDTH LFCLLACDQD SCCDGFIVTQ1740
 1741 VKEGPTICGL LSAPDILVCH INDWRDASDT QANGTCAGVT YDQGSRQMTM SLGGQEFLQG1800
 1801 LTLLEGTQDS FISFQQVYLW KDSDIGSRPE SMGCGRGMVP KSEAPEGADM ATELFSPVDI1860
 1861 TQVIVNTSHS LPSQQYWLST HLFSAEQANL WCLSRCAQEP VFCQLADIME SSSLYFTCSL1920
 1921 YPEAQVCDND VESNAKNCSQ ILPRQPTALF QRKVVLNDRV KNFYTRLPFQ KLSGISIRDR1980
 1981 IPMSEKLISN GFFECERLCD RDPCCTGFGF LNVSQMQGGE MTCLTLNSMG IQTCSEENGA2040
 2041 TWRILDCGSE DTEVHTYPFG WYQKPAVWSD APSFCPSAAL QSLTEEKVAL DSWQTLALSS2100
 2101 VIIDPSIKHF DVAHISISAT RNFSLAQDFC LQECSRHQDC LVTTLQIQQG VVRCVFYPDI2160
 2161 QSCEHSLRSK TCWLLLHEEA AYIYRKSGAP LHQSDGISTP SVHIDSFGQL QGGSQVVKVG2220
 2221 TAWKQVYQFL GVPYAAPPLA ENRFQAPEVL NWTGSWDATK LRSSCWQPGT RTPTPPQISE2280
 2281 DCLYLNVFVP ENLVSNASVL VFFHNTVEME GSGGQLNIDG SILAAVGNLI VVTANYRLGV2340
 2341 FGFLSSGSDE VAGNWGLLDQ VAALTWVQTH IGAFGGDPQR VTLAADRGGA DVASIHLLIT2400
 2401 RPTRLQLFRK ALLMGGSALS PAAIISPDRA QQQAAALAKE VGCPNSSVQE VVSCFRQKPA2460
 2461 NILNEAQTKL LAVSGPFHYW GPVVDGQYLR ELPSRRLKRP LPVKVDLLIG GSQDDGLINR2520
 2521 AKAVKQFEES QGRTNSKTAF YQALQNSLGG EDSDARILAA AIWYYSLEHS TDDYASFSRA2580
 2581 LENATRDYFI ICPIVNMASL WARRTRGNVF MYHVPESYGH GSLELLADVQ YAFGLPFYSA2640
 2641 YQGYFSTEEQ SLSLKVMQYF SNFIRSGNPN YPHEFSQKAA EFATPWPDFV PGAGGESYKE2700
 2701 LSAQLPNRQG LKKADCSFWS KYIQTLKDAD GAKDAQLTKS GEEDLEVGPG SEEDFSGSLE2760
 2761 PVPKSYSK

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