YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157821261, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFWGQILWT LLSGPRGRRG APQGWAFNSW KTYSSPAGLS SATGIVNHWT RVFEERGIPE  60
   61 ARESSEYIVA HVLGAKTFQS LRPALWTKPL TPQQLECIQE LCNHRLQRMP VQYILGEWDF 120
  121 QGLNLKMAPP VFIPRPETEE LVEWVLEEVA QRPPAVRAQD GPLILEVGCG SGAIALSLLS 180
  181 QLPKTQVIAV DKEEAAVSLT LENAQRLQLQ DRIRIIHLDI TSEGCCTHLL PWGPMDLVVS 240
  241 NPPYIFRKDM EQLAPEIRSY EDLVALDGGD EGMDIITHIL TLAPWLLNAS GSIFLEVDPR 300
  301 HPELVSSWLQ SQPDLHLSLV GVREDFCGRP RFLHVQKSAP

Type	Start	End	Confidence
Signal Peptide	1	20	0.60
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	340	0.98