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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|61557097, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVPLAWCV ALCCWGCAAP KDTQTEADSP FVGNPGNITG ARGLTGTLRC ELQVQGEPPE  60
   61 VMWLRDGQIL ELADNTQTQV PLGEDWQDEW KVVSQLRISA LQLSDAGEYQ CMVHLEGRTF 120
  121 VSQPGFVGLE GLPYFLEEPE DKAVPANTPF NLSCQAQGPP EPVTLLWLQD AVPLAPVAGY 180
  181 SFQHSLQAPG LNKTSSFSCE AHNAKGVTTS RTATITVLPQ RPHNLHVVSR HPTELEVAWI 240
  241 PTLSGIYPLT HCTLQAVLSN DGVGVWLGKS DPPEEPLTVQ VSVPPHQLRL EKLLPHTPYH 300
  301 IRVSCTSSQG PSPWTHWLPV ETTEGVPLGP PENVSAMRNG SQALVRWQEP REPLQGTLLG 360
  361 YRLAYRGQDT PEVLMDIGLT REVTLELRGD RPVANLTVSV AAYTSAGDGP WSLPVPLEPW 420
  421 RPVSEPPPPA FSWPWWYVLL GALVAAACVL ILTLFLVHRR KKETRYGEVF EPTVERGELV 480
  481 VRYRARKSYS RRTTEATLNS LGISEELKEK LRDVMVDRHK VALGKTLGEG EFGAVMEGQL 540
  541 NQDDSILKVA VKTMKIAICT RSELEDFLSE AVCMKEFDHP NVMRLIGVCF QGSDREGFPE 600
  601 PVVILPFMKH GDLHSFLLYS RLGDQPVFLP TQMLVKFMAD IASGMEYLST KRFIHRDLAA 660
  661 RNCMLNENMS VCVADFGLSK KIYNGDYYRQ GRIAKMPVKW IAIESLADRV YTSKSDVWSF 720
  721 GVTMWEIATR GQTPYPGVEN SEIYDYLRQG NRLKQPLDCL DGLYALMSRC WELNPRDRPS 780
  781 FAELREDLEN TLKALPPAQE PDEILYVNMD EGGSHLEPRG AAGGADPPTQ PDPKDYCSCL 840
  841 TAADVHSAGR YVLCPSTAPG PTLSADRGCP APPGQEDGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle