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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126632812
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIISLLDEDE PQLKEFALHK LNSVVNDFWA EISESVGKIE VLYEDETFRS REFAALVASK  60
   61 VFYHLGAFDE SLSYALGAGD LFNVNDDSEY VETIIAKCID HYTKQRVENA ELPEEEEKKD 120
  121 IDPRLEGIVN KMFQRCLGDH KYKQAIGIAL ETRRLDIFEK TILESNDIGG LLAYSLKICM 180
  181 SLMQNKKFRN EVLRVLVKLY MNLEKPDFIN VCQCLIFLDD PQAVSDILEK LVKEDNLLMA 240
  241 YQICFDLYES ASQQFLSSVI QNLRTVGTPI PAVPGSTNTG TVPTPDKDSD SMETEDKAGS 300
  301 SPAGKTADAK DEPKDQNSKM IKILSGEMAI ELHLQFLIRN NNTDLMILKN TKDAVRNSVC 360
  361 HTATVIANSF MHTGTTSDQF LRENLEWLAR ATNWAKFTAT ASLGVIHKGH EKEALQLMAT 420
  421 YLPKDTSPGS AYQEGGGLYA LGLIHANHGG DIIDYLLSQL KNASNDIVRH GGALGLGLAA 480
  481 LGTARQDVYD LLKSNLYQDD AVTGEAAGLA LGLVMLGSKS AQAIEDMVGY AQETQHEKIL 540
  541 RGLAVGIAMV MYGRMEEADA LIESLCRDKD PILRRSGMYT VAMAYCGSGN NKAIRRLLHV 600
  601 AVSDVNDDVR RAAVESIGFI MFRTPEQCPS VVSLLSESYN PHVRYGAAMA LGICCAGTGN 660
  661 KEAINLLEPM TNDPVNYVRQ GALIASALIM IQQTEVTCPK VNQFRQLYSK VINDKHDDVM 720
  721 AKFGAILAQG VLDAGGRNVT ISLQSRTGHT HMPSVVGLLV FTQFWFWFPL SHFLSLAFTP 780
  781 TAIIGLNKDL KMPKVQYRSN CKPSTFAYPP PLEVPKEKEK EKVSTAVLSI TAKAKKKEKE 840
  841 KKEKEEEKME VETQAEAEKE KKDEEKEKEK EKKKEPEPNF QMMENPARAL PAQLKVLTMP 900
  901 DSCRYQPFKP LHTGGIIILK DTSEEEEELV EPVSAHGPKI EEEEQEPEAP EPFEYIDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle