YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148226847, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVSRCVKTP REWLGVLWAL LLLSESVVCD GANGKREQEC YNYAGGHVYP GEAFRVPVSD  60
   61 HSLHLSKAKI SKPAPHWEGT AVINGEFKEL KLSDYKGKYL VFFFYPLDFT FVCPTEIIAF 120
  121 SDRVHEFQAI NAEVVACSVD SQFTHLAWIN TPRKQGGLGP MKIPLLSDLT HQISKDYGVF 180
  181 LEDQGHTLRG LFIIDGKGVL RQITMNDLPV GRSVDETLRL VQAFQYTDKH GEVCPAGWKP 240
  241 GSDTIIPDPA GKLKYFDKLN

Type	Start	End	Confidence
Signal Peptide	1	29	0.99
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	260	0.99