YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|126632140
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESYEKIDKL LNSVVDSLFG ERDTRVRGWL LLDSYTPTFL LTITYLLTIY LGTKYMRNRP  60
   61 AYSLKNVLLL YNFSVTVLSF YMLVELISAV WSAGYRLQCQ ALDEVGEADI RVAKVLWWYY 120
  121 FSKLIEFLDT IFIVLRKKNS QISFLHVYHH ASMFNIWWCV LNWIPCGQSF FGPTLNSFIH 180
  181 VLMYSYYGLA TIPSMHKYLW WKRYLTQAQL VQFVLTITHT VSAWVVPCGF PLGCLKFQTF 240
  241 YMCTLVVLFV NFYIQTYKKR KTEGGRMAKV GYPKHSHSNG VSSSLNGANS KQKLQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.61
Transmembrane Helix	34	53	0.82
Cytoplasmic	54	66	0.59
Transmembrane Helix	67	89	0.84
Non-Cytoplasmic	90	115	0.64
Transmembrane Helix	116	135	0.59
Cytoplasmic	136	145	0.80
Transmembrane Helix	146	166	0.78
Non-Cytoplasmic	167	177	0.62
Transmembrane Helix	178	200	0.78
Cytoplasmic	201	209	0.79
Transmembrane Helix	210	230	0.88
Non-Cytoplasmic	231	236	0.76
Transmembrane Helix	237	257	0.91
Cytoplasmic	258	295	0.98