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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: P3H1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAVAAAAAS RATAESEPEW NVAAPDLLYA EGTAAYARGD WPGVVLNMER ALRSRAALRA  60
   61 LRLRCRTRCA TELPWAPDLD LGPASSLNHD PGAAALHDLR FFGALLRRAA CLRRCLGPPS 120
  121 AHLLSEELDL EFNKRSPYNY LQVAYFKINK LEKAVAAAHT FFVGNPEHME MRQNLDYYQT 180
  181 MSGVKEEDFK DLEAKPHMHE FRLGVRLYSE EKPLEAVPHL EAALQEYFVA DEECRALCEG 240
  241 PYDYDGYNYL DYSADLFQAI TDHYVQVLSC KQNCVTELAS HPSREKPFED FLPSHYNYLQ 300
  301 FAYYNIGNYT QAIECAKTYL LFFPNDEVMS QNLAYYTAVL GEEEASSISP RENAQEYRHR 360
  361 SLLEKELLFF AYDIFGIPFV DPDSWTPEEV IPKRLQEKQK SERETAVRIS QEIGNLMKEI 420
  421 ETLVEEKTKE SLDVSRLTRE GGPLLYEGIN LTMNSKVLNG SQRVVMDGVI SDDECQELQR 480
  481 LTNAAATSGD GYRGQTSPHT PNEKFYGVTV LKALKLGQEG KVPLQSAHMY YNVTEKVRRV 540
  541 MESYFRLDTP LYFSYSHLVC RTAIEESQAE RKDSSHPVHV DNCILNAESL VCIKEPPAYT 600
  601 FRDYSAILYL NGDFDGGNFY FTELDAKTVT AEVQPQCGRA VGFSSGTENP HGVKAVTRGQ 660
  661 RCAIALWFTL DPRHSERDRV QADDLVKMLF SPEEVDLPQE QPLPDQQGSP KPGEESLSDR 720
  721 ESQPKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle