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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62643585, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKCWSAVLI LGFIFLASEG RPTKESGYGL KYYQPLTRLR HKQEKSQESS RIKEFLIHDG  60
   61 PFGSCENKYC GLGRHCVISR ETRHAECTCM DLCKQHYKPV CGSDGEFYEN HCEVHRAACL 120
  121 KKQKITIVHN EDCFFKGDNC MTTEYSKMKS MLLDLQNQKY ITQENENPNS DDISRKKTLV 180
  181 DQMFKYFDAD SNGLVDINEL TQVIKQEELN KDLSDCTLYD LLKYDDFNAD KHLALEEFYR 240
  241 AFQVIQLSLP EDQRVSITAA TVGQSAVLSC AVVGTLRPPI IWKRNNIVLN NLDLEDINDF 300
  301 GDDGSLYITK VTTVHMGNYT CYADGYEDVH QTHIFQVNVP PVIRVYPESQ AREPGVTASL 360
  361 RCHAEGIPDP QLGWLKNGID ITPKLSKQLT LQANGSEVHI SNVRYEDTGA YTCIARNEAG 420
  421 VDEDISSLFV EDSARKTLAN ILWREEGLGI GNMFYVFYDD GVKVIQPTEC EFQRHIKPSE 480
  481 KLLGFQDEVC PKDEEDEVQR CVWASAVNVK DKFIYVAQPT LDRILIVDVQ SQKVVQAVST 540
  541 DPVPVKLHYD KSHDQVWVLS WGSMEKTSPT LQVITLASGN VPHHTIHTQP VGKQFDRVDD 600
  601 FFIPTPTLII THMRFGFILH KDESALHKID LETMSYIKTI SLKDSKCIPL SLAYSHLGGY 660
  661 YFISCKPDIT GAIPPQLVVD SVTDSIIGSN SDVTGTPYVS PDGHYLVSVN DVKGLVRVQY 720
  721 ITIRGEILDA FDIHTNLHIS DLAFQPSFTE AHQYNIYGSS SQQTDVLFVE LSTGKVKMIK 780
  781 SLKEPLKTED WPWSPKNRHI QGSGLFGQYL MTPSKDSLFI LDGRLNKLNC EITEVQKGNT 840
  841 VVWVGDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle