YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	APOM_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHQVWAALL YLYGLLFNSM NQCPEHSQLM TLGMDDKETP EPHLGLWYFI AGAAPTMEEL  60
   61 ATFDQVDNIV FNMAAGSAPR QLQLRATIRT KNGVCVPRKW TYHLTEGKGN TELRTEGRPD 120
  121 MKTDLFSISC PGGIMLKETG QGYQRFLLYN RSPHPPEECV EEFQSLTSCL DFKAFLVTPR 180
  181 NQEACPLSSK

Type	Start	End	Confidence
Signal Peptide	1	21	0.61
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	190	0.98