YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18150429
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WSSKVLMSSG NEDTKSDLLL TSMDLKHLSV PTLPLPEVQC FVFNVEYMNC TWNSSSEPQP  60
   61 TNLTMHYRYK GSDNNTFQEC SHYLFSKEIT SGCQIQKEDI QLYQTFVVQL QDPQKPQRRA 120
  121 EQKLNLQNLV IPWAPENLTL YNLSESQVEL RWKSRYIERC LQYLVQYRSN RDRSWTEQIV 180
  181 DHEPRFSLPS VDEQKLYPFR VRSRFNPICG STQQWSKWSQ PIHWGSHTAE ENPSLFALEA 240
  241 VLIPVGTMGL IITLIFVYCW LERMPXIPXI KNLEIWLL

Type	Start	End	Confidence
Non-Cytoplasmic	1	239	0.92
Transmembrane Helix	240	261	0.93
Cytoplasmic	262	278	0.91