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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: I13R2_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.87
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALMAVNTRC LCLFLLCTIT GHSLEIKVNP PQDFEILDPG LLGYLYLQWK PPVVMDNFKE  60
   61 CKLEYELKYR NVDSDSWKTI ITRNLIYKDG FDLNKGIEGK IRTHLSEHCT NGSEVQSPWT 120
  121 EASYGIADEG SLGTKIQDMK CIYYNWQYLV CSWKPGKTVH SDTNYTMFFW YEGLDHALQC 180
  181 ADYLQDNEKN VGCKLSNLDS SDYKDFFIRV NGSSKLEPIR SSYMVFQLQN IVKPLPPEFL 240
  241 HISVENSIDI RMKWSTPGGP IPPSCYTYEI VVREDDISWE SATDKNDMKL KRRANESEDL 300
  301 CFFVRCKINI YCADDGIWSE WSEEECWEGY TGPDSKIVFI VPVCLFFIFL LLLLCLIVEK 360
  361 EDPEPTLSLH VDLNKEMYAY EETLC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle