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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GSLG1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVCGRVRRM FRLSAALQLL LLVAAGVQNS HGQGQGLGVN FGPFAGQAGG GNPVGQQPPQ  60
   61 LPQLSQQQQQ QQPPPQQQQP FPAGGLPARR GGAGPGGTGG GWKLAEEESC REDVTRVCPK 120
  121 HTWSNNLAVL ECLQDVREPE NEISSDCNHL LWNYKLNLTT DPKFESVARE VCKSTISEIK 180
  181 ECAEEPVGKG YMVSCLVDHR GNITEYQCHQ YITKMTAIIF SDYRLICGFM DDCKNDINLL 240
  241 KCGSIRLGEK DAHSQGEVVS CLEKGLVKEA EEKEPKIQVS ELCKKAILRV AELSSDDFHL 300
  301 DRHLYFACRD DRERFCENTQ AGEGRVYKCL FNHKFEESMS EKCREALTTR QKLIAQDYKV 360
  361 SYSLAKSCKS DLKKYRCNVE NLPRSREARL SYLLMCLESA VHRGRQVSSE CQGEMLDYRR 420
  421 MLMEDFSLSP EIILSCRGEI EHHCSGLHRK GRTLHCLMKV VRGEKGSLGM NCQQALQTLI 480
  481 QETDPGADYR IDRALNEACE SVIQTACKHI RSGDPMILSC LMEHLYTEKM VEDCEHRLLE 540
  541 LQYFISRDWK LDPVLYRKCQ GDASRLCHTH GWNETSELMP PGAVFSCLYR HAYRTEEQGR 600
  601 RLSRECRAEV QRILHQRAMD VKLDPALQDK CLIDLGKWCS EKTETGQELE CLQDHLDDLA 660
  661 VECRDIVGNL TELESEDIQI EALLMRACEP IIHNFCHDVA DNQIDSGDLM ECLIQNKHQK 720
  721 DMNEKCAIGV THFQLVQMKD FRFSYKFKMA CKEDVLKLCP NIKKKVDVVI CLSTTVRNDT 780
  781 LQEAKEHRVS LKCRKQLRVE ELEMTEDIRL EPDLYEACKS DIKNYCSTVQ YGNAQIIECL 840
  841 KENKKQLSTR CHQRVFKLQE TEMMDPELDY TLMRVCKQMI KRFCPEADSK TMLQCLKQNK 900
  901 NSELMDPKCK QMITKRQITQ NTDYRLNPVL RKACKADIPK FCHGILTKAK DDSELEGQVI 960
  961 SCLKLRYADQ RLSSDCEDQI RIITQESALD YRLDPQLQLH CSDEIANLCA EEAAAQEQTG1020
 1021 QVEECLKVNL LKIRTELCKK EVLNMLKESK ADIFVDPVLH TACALDIKHH CAAITPGRGR1080
 1081 QMSCLMEALE DKRVRLQPEC KKRLNDRIEM WSYAAKVAPA DGFSDLAMQV MTSPSKNYIL1140
 1141 SVISGSICIL FLIGLMCGRI TKRVTRELKD R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle