YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MUC2_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLPLARLVA VCLVLALAKG LELQKEARSR NHVCSTWGDF HYKTFDGDVF RFPGLCDYNF  60
   61 ASDCRDSYKE FAVHLKRGLD KAGGHSSIES VLITIKDDTI YLTHKLAVVN GAMVSTPHYS 120
  121 SGLLIEKNDA YTKVYSRAGL SLMWNREDAL MVELDGRFQN HTCGLCGDFN GMQANNEFLS 180
  181 DGIRFSAIEF GNMQKINKPE VVCEDPEEVQ EPESCSEHRA ECERLLTSTA FEDCQARVPV 240
  241 ELYVLACMHD RCQCPQGGAC ECSTLAEFSR QCSHAGGRPE NWRTASLCPK KCPGNMVYLE 300
  301 SGSPWLDTCS HLEVSSLCEE HYMDGCFCPE GTVYDDITGS GCIPVSQCHC KLHGHLYMPG 360
  361 QEITNDCEQC VCNAGRWMCK DLPCPETCAL EGGSHITTFD GKKFTFHGDC YYVLTKTKYN 420
  421 DSYALLGELA SCGSTDKQTC LKTVVLLTDN KKNVVAFKSG GSVLLNEMEV SLPHVAASFS 480
  481 IFKPSSYHIV VNTMFGLRLQ IQLVPVMQLF VTLDQSAQGQ VQGLCGNFNG LESDDFMTSG 540
  541 GMVEATGAGF ANTWKAQSSC HDKLDWLDDP CPLNIESANY AEHWCSLLKR SETPFARCHL 600
  601 AVDPTEYYKR CKYDTCNCQN NEDCMCAALS SYARACAAKG VMLWGWRESV CNKDVHACPS 660
  661 SQIFMYNLTT CQQTCRSISE GDTHCLKGFA PVEGCGCPDH TFMDEKGRCV PLSKCSCYHH 720
  721 GLYLEAGDVI LRQEERCICR NGRLQCTQVK LIGHTCLSPQ ILVDCNNLTA LAIREPRPTS 780
  781 CQTLVARYYH TECISGCVCP DGLLDNGRGG CVVEDECPCI HNKQFYDSGK SIKLDCNNTC 840
  841 TCQKGRWECT RYACHSTCSI YGSGHYITFD GKHYDFDGHC SYVAVQDYCG QNSTGSFSII 900
  901 TENVPCGTTG VTCSKAIKIF IGGTELKLVD KHRVVKQLEE GHHVPFITRE VGLYLVVEVS 960
  961 SGIIVIWDKK TTIFIKLDPS YKGNVCGLCG NFDDQTKNDF TTRDHMVVAS ELDFGNSWKE1020
 1021 ASTCPDVSHN PDPCSLNPHR RSWAEKQCSI IKSDVFLACH GKVDPTVFYD ACVHDSCSCD1080
 1081 TGGDCECFCS AVASYAQECT KAEACVFWRT PDLCPVFCDY YNPPDECEWH YEPCGNRSFE1140
 1141 TCRTLNGIHS NISVSYLEGC YPRCPEDRPI YDEDLKKCVS GDKCGCYIED TRYPPGGSVP1200
 1201 TDEICMSCTC TNTSEIICRP DEGKIINQTQ DGIFCYWETC GSNGTVEKHF EICVSSTLSP1260
 1261 TSMTSFTTTS TPISTTPIST TITTTSATAT TTVPCCFWSD WINNNHPTSG NGGDRENFEH1320
 1321 VCSAPENIEC RAATDPKLDW TELGQKVQCN VSEGLICNNE DQYGTGQFEL CYDYEIRVNC1380
 1381 CFPMEYCLST VSPTTSTPIS STPQPTSSPT TLPTTSPLTS SATSPTTSHI TSTVSPTTSP1440
 1441 TTSTTSPTTS PTTSTTSPTT STTSPTPSPT TSTTSPTPSP TTSTTSPTPS PTTSTTSPTT1500
 1501 SPITSPTTST TSP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle