YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18266419
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDTFFDHFNR VQWAFSICEI NGMILVGLWL FQWLLLKYKS IISRRFFCIV GTLYLYRCIT  60
   61 MYVTTLPVPG MHFNCSPKLF GDWEAQVRRI MKLIAGGGLS ITGSHNMCGD YLYSGHTVML 120
  121 TLTYLFIKEY SPRR

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.93
Transmembrane Helix	13	35	0.91
Cytoplasmic	36	45	0.83
Transmembrane Helix	46	66	0.79
Non-Cytoplasmic	67	108	0.83
Transmembrane Helix	109	127	0.78
Cytoplasmic	128	134	0.79