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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RETST_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWITALLLVV LLLVVVHRVY VGLFTGSSPN PFAEDVKRPP EPLVTDKEAR KKVLKQAFSV  60
   61 SRVPEKLDAV VIGSGIGGLA SAAVLAKAGK RVLVLEQHTK AGGCCHTFGE NGLEFDTGIH 120
  121 YIGRMREGNI GRFILDQITE GQLDWAPMAS PFDLMILEGP NGRKEFPMYS GRKEYIQGLK 180
  181 EKFPKEEAVI DKYMELVKVV AHGVSHAILL KFLPLPLTQL LNKFGLLTRF SPFCRASTQS 240
  241 LAEVLKQLGA SPELQAVLSY ILPTYGVTPS HTTFSLHALL VDHYIQGAYY PRRGSSEIAF 300
  301 HTIPLIQRAG GAVLTRATVQ SVLLDSAGRA CGVSVKKGQE LVNIYCPVVI SNAGMFNTYQ 360
  361 HLLPESVRYL PDVKKQLTMV KPGLSMLSIF ICLKGTKEEL KLQSTNYYVY FDTDMDKAME 420
  421 CYVSMPKEKA PEHIPLLFIP FPSSKDPTWE DRFPDRSTMT VLVPTAFEWF EEWQEEPKGK 480
  481 RGVDYETLKN TFREASMSVI MKLFPQLEGK VESVTGGSPL TNQYYLAAHR GATYGADHDL 540
  541 ARLHPHAMAS LRAQTPIPNL YLTGQDIFTC GLMGALQGAL LCSSAILKRN LYSDLQALGS 600
  601 KVRAQKKKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle