YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62078455, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSKLLTMEY LVHPGTLSLA AGVACGMCLG WGLRSHLGIF PQNSTSETNR DTEMGTEASI  60
   61 LGESGEYKMI LVVRTDLKMG KGKVAAQCSH AAVSAYKQIQ RRNPQVLKEW EYCGQPKVVV 120
  121 KAPDEDSLIQ LLTHAKALGL TVSLIQDAGR TQIEPGSRTV LGIGPGPVEL IDEVTGHLKL 180
  181 Y

Type	Start	End	Confidence
Cytoplasmic	1	9	0.69
Transmembrane Helix	10	33	0.76
Non-Cytoplasmic	34	181	0.84