YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12750773
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CTDNISVQMG LTSTWRYGRG PGIGTVTMVS WGRFICLVLV TMATLSLARP SFSLVEDTTL  60
   61 EPEGAPYWTN TEKMEKRLHA VPAANTVKFR CPAGGNPTPT MRWLKNGKEF KQEHRIGGYK 120
  121 VRNQHWSLIM ESVVPSDKGN YTCVVENEYG SINHTYHLDV VERSPHRPIL QAGLPANAST 180
  181 VVGGDVEFVC KVYSDAQPHI QWIKHVEKNG SKYGPDGLPY LKVLKAAGVN TTDKEIEVLY 240
  241 IRNVTFEDAG EYTCLAGNSI GISFHSAWLT VLPAPVREKE ITASPDYLEI AIYSIGVFLI 300
  301 ACMVVTVIFC RMKTTTKKPD FSSQPAVHKL

Type	Start	End	Confidence
Cytoplasmic	1	22	0.67
Transmembrane Helix	23	45	0.77
Non-Cytoplasmic	46	289	0.75
Transmembrane Helix	290	310	0.94
Cytoplasmic	311	330	0.92