YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12750771
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CYHNISVQMG LTSTWRYGTG PGIGTVTMVS WGRFICLVLV TMATLSLARP SFSLVEDTTL  60
   61 EPEDAISSGD DEDDTDSSED FVSENRSNQR APYWTNTEKM EKRLHAVPAA NTVKFRCPAG 120
  121 GNPTPTMRWL KNGKEFKQEH RIGGYKVRNQ HWSLIMESVV PSDKGNYTCL VENEYGSINH 180
  181 TYHLDVVERS PHRPILQAGL PANASTVVGG DVEFVCKVYS DAQPHIQWIK HVEKNGSKYG 240
  241 PDGLPYLKVL KHSGINSSNA EVLALFNVTE MDAGEYICKV SNYIGQANQS AWLTVLPKQQ 300
  301 APVREKEITA SPDYLEIAIY CIGVFLIACM VVTVIFCRMK TTTKKPDFSS QPAVHKL

Type	Start	End	Confidence
Cytoplasmic	1	22	0.73
Transmembrane Helix	23	45	0.71
Non-Cytoplasmic	46	316	0.93
Transmembrane Helix	317	337	0.93
Cytoplasmic	338	357	0.89